Use evaluate

[gogonzo]

eval_code caches now outputs of the code in the attr(<code line>, "outputs"). See the tests of get_outputs to see how it works.

[github-actions]

Code Coverage Summary

Filename                         Stmts    Miss  Cover    Missing
-----------------------------  -------  ------  -------  ---------
R/qenv-c.R                          55       0  100.00%
R/qenv-class.R                      13       0  100.00%
R/qenv-concat.R                      7       0  100.00%
R/qenv-constructor.R                 1       0  100.00%
R/qenv-errors.R                      4       4  0.00%    6-9
R/qenv-eval_code.R                  60       1  98.33%   40
R/qenv-extract.R                    30       0  100.00%
R/qenv-get_code.R                   24       0  100.00%
R/qenv-get_env.R                     3       1  66.67%   27
R/qenv-get_messages.r                5       0  100.00%
R/qenv-get_outputs.R                 6       0  100.00%
R/qenv-get_var.R                    26       0  100.00%
R/qenv-get_warnings.R                5       0  100.00%
R/qenv-join.R                        7       7  0.00%    137-151
R/qenv-length.R                      2       1  50.00%   2
R/qenv-show.R                       29      29  0.00%    19-50
R/qenv-within.R                      8       0  100.00%
R/utils-get_code_dependency.R      247       2  99.19%   160, 258
R/utils.R                           42       0  100.00%
TOTAL                              574      45  92.16%

Diff against main

Filename                         Stmts    Miss  Cover
-----------------------------  -------  ------  --------
R/qenv-class.R                      +1       0  +100.00%
R/qenv-eval_code.R                  -2       0  -0.05%
R/qenv-get_outputs.R                +6       0  +100.00%
R/utils-get_code_dependency.R       +2       0  +0.01%
R/utils.R                          +12       0  +100.00%
TOTAL                              +19       0  +0.27%

Results for commit: d17b8df

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Tests Summary

  1 files   14 suites   5s ⏱️
170 tests 167 ✅ 3 💤 0 ❌
260 runs  257 ✅ 3 💤 0 ❌

Results for commit d17b8df.

♻️ This comment has been updated with latest results.

[github-actions]

Unit Test Performance Difference

Test Suite	$Status$	Time on main	$±Time$	$±Tests$	$±Skipped$	$±Failures$	$±Errors$
get_outputs	👶		$+0.51$	$+16$	$0$	$0$	$0$

Additional test case details

Test Suite	$Status$	Time on main	$±Time$	Test Case
get_outputs	👶		$+0.05$	explicitly_printed_object_uses_newly_registered_print_method_and_returned_as_console_output_string
get_outputs	👶		$+0.04$	explicitly_printed_objects_are_returned_as_console_output_string_in_a_list
get_outputs	👶		$+0.04$	get_output_implicitly_printed_S4_object_is_returned_asis_in_a_list_and_identical_to_the_one_in_the_environment
get_outputs	👶		$+0.05$	implicitly_printed_list_is_returned_asis_even_if_its_print_is_overridden
get_outputs	👶		$+0.09$	implicitly_printed_objects_are_returned_asis_in_a_list_and_are_identical_to_ones_in_the_environment
get_outputs	👶		$+0.03$	intermediate_plots_are_not_kept
get_outputs	👶		$+0.01$	messages_are_returned_asis_in_a_list
get_outputs	👶		$+0.03$	printed_plots_are_returned_as_recordedplot_in_a_list_1_
get_outputs	👶		$+0.03$	printed_plots_are_returned_as_recordedplot_in_a_list_2_
get_outputs	👶		$+0.02$	prints_inside_for_are_bundled_together
get_outputs	👶		$+0.12$	returns_an_empty_list_if_nothing_is_printed
get_outputs	👶		$+0.02$	warnings_are_returned_asis_in_a_list
qenv_eval_code	💀	$0.02$	$-0.02$	alone_comments_at_the_end_of_the_source_are_considered_as_continuation_of_the_last_call
qenv_eval_code	💀	$0.02$	$-0.02$	comments_alone_are_pasted_to_the_next_following_call_element
qenv_eval_code	💀	$0.01$	$-0.01$	comments_at_the_end_of_src_are_added_to_the_previous_call_element
qenv_eval_code	👶		$+0.01$	object_printed_explicitly_is_stored_as_string_in_the_outputs_attribute_of_a_code_element
qenv_eval_code	👶		$+0.02$	object_printed_implicitly_is_stored_asis_in_the_outputs_attribute_of_a_code_element
qenv_eval_code	👶		$+0.03$	plot_cannot_modified_previous_plots_when_calls_are_seperate
qenv_eval_code	👶		$+0.02$	plot_output_is_stored_as_recordedplot_in_the_outputs_attribute_of_a_code_element

Results for commit b53f9e1

♻️ This comment has been updated with latest results.

[averissimo]

💯

Fantastic new feature to qenv()!

Left one last comment about adding the information to vignettes

[averissimo]

Should we add a small section on the vignette as well? in addition to "### Warnings and messages in qenv objects"

diff --git a/vignettes/qenv.Rmd b/vignettes/qenv.Rmd
index 4859e32c..302b6846 100644
--- a/vignettes/qenv.Rmd
+++ b/vignettes/qenv.Rmd
@@ -126,7 +126,7 @@ The feasibility of joining `qenv` objects hinges on the contents of the environm
 
 ### Warnings and messages in `qenv` objects
 
-In cases where warnings or messages arise while evaluating code within a `qenv` environment, these are captured and stored within the `qenv` object. Access these messages and warnings using below
+In cases where warnings or messages arise while evaluating code within a `qenv` environment, these are captured and stored within the `qenv` object. Access these messages and warnings using `get_messages()` and `get_warnings()` functions as shown below.
 
 ```{r}
 q_message <- eval_code(qenv(), quote(message("this is a message")))
@@ -138,6 +138,15 @@ get_warnings(q_warning)
 
 If any of above returns `NULL`m then no warnings nor messages were present.
 
+### Outputs in `qenv` objects
+
+When evaluating code in a `qenv`, the outputs are captured and stored in a list. This includes printed objects, plots, warnings, and messages. You can retrieve these outputs using the `get_outputs()` function.
+
+```{r}
+q_output <- eval_code(qenv(), quote(plot(1:10)))
+get_outputs(q_output)
+```
+
 ## Utilizing `qenv` inside `shiny` applications
 
 These functions can be seamlessly integrated into `shiny` applications to produce reproducible outputs. In the example below, the `rcode` section showcases the code employed for generating the output.

[gogonzo]

I've included some info about get_outputs(). Please have a look once again before I merge