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@ENCODE-AWG

ENCODE-AWG

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  1. encode-202006-jamboree-detrout-rna-sc-pipeline encode-202006-jamboree-detrout-rna-sc-pipeline Public

    My efforts at getting the single cell RNA seq pipelines to run

    Jupyter Notebook 1

  2. locusselect locusselect Public

    Forked from kundajelab/locusselect

    extraction of data embeddings from deep learning model layers; computation of embedding distance and visualization with umap/tsne

    Jupyter Notebook

  3. locusselect_applications locusselect_applications Public

    wrapper scripts, examples, jupyter notebooks for locusselect project. The locusselect repo contains the core functional python scripts needed for locus selection.This repo provides a way to track a…

    Jupyter Notebook

  4. HiCSampler HiCSampler Public

    Forked from JRowleyLab/HiCSampler

    Python 1

  5. nawg_distal_reg_enhancer_synergy nawg_distal_reg_enhancer_synergy Public

    Jupyter Notebook

  6. tss-annotation tss-annotation Public

    Python 2

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