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  • Florida Bureau of Public Health Laboratories
  • Jacksonville, FL

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@BPHL-Molecular

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  1. BPHL-Molecular/Amelia BPHL-Molecular/Amelia Public

    A Nextflow pipeline is used to analyze Targeted NGS of Mycoplasma genitalium. The outputs include QC, amplicon statistics, SNP calling, amino acid variation detection, etc.

    Nextflow

  2. BPHL-Molecular/Sanibel BPHL-Molecular/Sanibel Public

    A Nextflow pipeline to analyze NGS data in fastq format from bacterial genome

    Nextflow 5 1

  3. BPHL-Molecular/Pensacola BPHL-Molecular/Pensacola Public

    A Nextflow pipeline to analyze NGS data of Candida auris from PacBio

    Perl 1 1

  4. BPHL-Molecular/Daytona_HAV_VPB BPHL-Molecular/Daytona_HAV_VPB Public

    A pipeline for comprehensive sequence analyses of Hepatitis A Virus (HAV) based on VP1-P2B junction region.

    Python 1

  5. BPHL-Molecular/Daytona_HCV BPHL-Molecular/Daytona_HCV Public

    A pipeline for Hepatitis C virus

    Python