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epassaro merged 1 commit into from
Aug 17, 2025
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Post-release 2025.08.17 #3239

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72 changes: 72 additions & 0 deletions CHANGELOG.md
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## Changelog

### release-2025.08.17 (2025/08/13 15:47)
- [3219](https://github.com/tardis-sn/tardis/pull/3219) Apply diatixis across the docs (3219) (@hmperk18)
- [3237](https://github.com/tardis-sn/tardis/pull/3237) Bump actions/download-artifact from 4 to 5 (3237) (@dependabot[bot])
- [3238](https://github.com/tardis-sn/tardis/pull/3238) Bump codecov/codecov-action from 4 to 5 (3238) (@dependabot[bot])
- [3236](https://github.com/tardis-sn/tardis/pull/3236) Bump juliangruber/read-file-action from 1.0.0 to 1.1.7 (3236) (@dependabot[bot])
- [3233](https://github.com/tardis-sn/tardis/pull/3233) Skip continuum tests (3233) (@andrewfullard)
- [3200](https://github.com/tardis-sn/tardis/pull/3200) 3131: solved Docs Template contains fork reference (3200) (@jhalakbhandari)
- [3123](https://github.com/tardis-sn/tardis/pull/3123) Fix logger widget vscode scrolling (3123) (@atharva-2001)
- [3186](https://github.com/tardis-sn/tardis/pull/3186) Add Dependabot for GitHub Actions Updates (3186) (@atharva-2001)
- [3194](https://github.com/tardis-sn/tardis/pull/3194) Updated readme (3194) (@Knights-Templars)
- [3224](https://github.com/tardis-sn/tardis/pull/3224) Refactor FormalIntegral(s) into solver (3224) (@hmperk18)
- [3050](https://github.com/tardis-sn/tardis/pull/3050) Tests for workflows: Simple, Standard, and Inner Velocity Solver (3050) (@erinvisser)
- [3221](https://github.com/tardis-sn/tardis/pull/3221) Revert "Restructure/transport solver v1" (3221) (@andrewfullard)
- [3215](https://github.com/tardis-sn/tardis/pull/3215) make smaller he regressions data (3215) (@wkerzendorf)
- [3177](https://github.com/tardis-sn/tardis/pull/3177) Refactor `make_source_function` into solver (3177) (@hmperk18)
- [3218](https://github.com/tardis-sn/tardis/pull/3218) Restructure/transport solver v1 (3218) (@wkerzendorf)
- [3216](https://github.com/tardis-sn/tardis/pull/3216) Post-release 2025.08.03 (3216) (@tardis-bot)
### release-2025.08.03 (2025/07/31 14:08)
- [3212](https://github.com/tardis-sn/tardis/pull/3212) fix more \AA warnings (3212) (@hmperk18)
- [2976](https://github.com/tardis-sn/tardis/pull/2976) Restructure/gamma rays code1 (2976) (@wkerzendorf)
Expand Down Expand Up @@ -387,6 +404,7 @@
- [2580](https://github.com/tardis-sn/tardis/pull/2580) Removing flake8 job. (2580) (@KasukabeDefenceForce)
### release-2024.04.14 (2024/04/13 20:54)
- [2583](https://github.com/tardis-sn/tardis/pull/2583) Pre-release 2024.04.14 (2583) (@tardis-bot)
- [2328](https://github.com/tardis-sn/tardis/pull/2328) Grotrian diagram IPyWidget functionality (2328) (@AyushiDaksh)
### release-2024.04.08 (2024/04/08 09:41)
- [2576](https://github.com/tardis-sn/tardis/pull/2576) Pre-release 2024.04.07 (2576) (@tardis-bot)
- [2563](https://github.com/tardis-sn/tardis/pull/2563) Recategorizing tutorials as how-to guides to follow diataxis structure (2563) (@erinvisser)
Expand All @@ -395,6 +413,7 @@
- [2552](https://github.com/tardis-sn/tardis/pull/2552) Multiindex dataframe (2552) (@Knights-Templars)
### release-2024.04.01 (2024/04/01 10:03)
- [2566](https://github.com/tardis-sn/tardis/pull/2566) Pre-release 2024.03.31 (2566) (@tardis-bot)
- [2349](https://github.com/tardis-sn/tardis/pull/2349) Implemented Model Reader for CMFGen example (Also refactored Stella Reader) (2349) (@)
- [2554](https://github.com/tardis-sn/tardis/pull/2554) Remove Azure Compare Refdata Pipeline (2554) (@atharva-2001)
- [2555](https://github.com/tardis-sn/tardis/pull/2555) corrected blackbody luminosity density equation (2555) (@CePowers)
- [2556](https://github.com/tardis-sn/tardis/pull/2556) fixing typos, including pytest issue (2556) (@erinvisser)
Expand Down Expand Up @@ -481,17 +500,70 @@
- [2396](https://github.com/tardis-sn/tardis/pull/2396) Fix for Slack message (2396) (@epassaro)
### release-2023.08.20 (2023/08/19 20:43)
- [2397](https://github.com/tardis-sn/tardis/pull/2397) Pre-release 2023.08.20 (2397) (@tardis-bot)
- [2338](https://github.com/tardis-sn/tardis/pull/2338) Test conda-forge package installation (2338) (@epassaro)
- [2385](https://github.com/tardis-sn/tardis/pull/2385) Creating collisional excitation/deexcitation coefficient matrix for NLTE excitation treatment (2385) (@sonachitchyan)
- [2395](https://github.com/tardis-sn/tardis/pull/2395) Fixing the shape of the solution vector to be accurate in NLTE excitation treatment (2395) (@sonachitchyan)
- [2353](https://github.com/tardis-sn/tardis/pull/2353) Benchmarks Comments and Atom Data Cache BugFix (2353) (@atharva-2001)
- [2386](https://github.com/tardis-sn/tardis/pull/2386) Integrate density in state object (2386) (@wkerzendorf)
- [2392](https://github.com/tardis-sn/tardis/pull/2392) Post-release 2023.08.13 (2392) (@tardis-bot)
### release-2023.08.13 (2023/08/13 17:04)
- [2391](https://github.com/tardis-sn/tardis/pull/2391) Pre-release 2023.08.13 (2391) (@tardis-bot)
- [2379](https://github.com/tardis-sn/tardis/pull/2379) Tests for doppler factor functions (2379) (@sonachitchyan)
- [2348](https://github.com/tardis-sn/tardis/pull/2348) Fixes gamma-ray notebook to run more easily (2348) (@andrewfullard)
- [2381](https://github.com/tardis-sn/tardis/pull/2381) Removed hardcoding of RPacket radius (2381) (@)
- [2384](https://github.com/tardis-sn/tardis/pull/2384) Post-release 2023.08.06 (2384) (@tardis-bot)
### release-2023.08.06 (2023/08/05 20:43)
- [2383](https://github.com/tardis-sn/tardis/pull/2383) Pre-release 2023.08.06 (2383) (@tardis-bot)
- [2382](https://github.com/tardis-sn/tardis/pull/2382) Remove outdated docstring from test_montecarlo.py (2382) (@chvogl)
- [2376](https://github.com/tardis-sn/tardis/pull/2376) Add init.py to energy input module (2376) (@andrewfullard)
- [2373](https://github.com/tardis-sn/tardis/pull/2373) Post-release 2023.07.30 (2373) (@tardis-bot)
### release-2023.07.30 (2023/07/29 20:47)
- [2372](https://github.com/tardis-sn/tardis/pull/2372) Pre-release 2023.07.30 (2372) (@tardis-bot)
- [2365](https://github.com/tardis-sn/tardis/pull/2365) integrate radiation field (2365) (@wkerzendorf)
- [2371](https://github.com/tardis-sn/tardis/pull/2371) Prevent empty convergence plot Error when n_iteration=1 (2371) (@DeerWhale)
- [2369](https://github.com/tardis-sn/tardis/pull/2369) Post-release 2023.07.23 (2369) (@tardis-bot)
### release-2023.07.23 (2023/07/23 10:47)
- [2368](https://github.com/tardis-sn/tardis/pull/2368) Pre-release 2023.07.23 (2368) (@tardis-bot)
- [2367](https://github.com/tardis-sn/tardis/pull/2367) integrate new packetsource (2367) (@wkerzendorf)
- [2366](https://github.com/tardis-sn/tardis/pull/2366) New packet source (extending 2352) (2366) (@wkerzendorf)
- [2354](https://github.com/tardis-sn/tardis/pull/2354) removed duplicate entry of afloers (2354) (@afloers)
- [2360](https://github.com/tardis-sn/tardis/pull/2360) restructure configuration object (2360) (@wkerzendorf)
- [2361](https://github.com/tardis-sn/tardis/pull/2361) add deprecated decorator (2361) (@wkerzendorf)
- [2359](https://github.com/tardis-sn/tardis/pull/2359) Rename NumbaPlasma to OpacityState (2359) (@andrewfullard)
- [2313](https://github.com/tardis-sn/tardis/pull/2313) Grotrian Diagram Plot Appearance (2313) (@AyushiDaksh)
- [2357](https://github.com/tardis-sn/tardis/pull/2357) Post-release 2023.07.16 (2357) (@tardis-bot)
### release-2023.07.16 (2023/07/16 15:15)
- [2356](https://github.com/tardis-sn/tardis/pull/2356) Pre-release 2023.07.16 (2356) (@tardis-bot)
- [2355](https://github.com/tardis-sn/tardis/pull/2355) Fixed spelling mistake in Wien's displacement law (2355) (@afloers)
- [2351](https://github.com/tardis-sn/tardis/pull/2351) Post-release 2023.07.09 (2351) (@tardis-bot)
### release-2023.07.09 (2023/07/09 12:30)
- [2350](https://github.com/tardis-sn/tardis/pull/2350) Pre-release 2023.07.09 (2350) (@tardis-bot)
- [2347](https://github.com/tardis-sn/tardis/pull/2347) Fix frame transformations of continuum opacity (2347) (@chvogl)
- [2327](https://github.com/tardis-sn/tardis/pull/2327) Refactor Model Reader on the Stella example (2327) (@wkerzendorf)
- [2346](https://github.com/tardis-sn/tardis/pull/2346) Post-release 2023.07.02 (2346) (@tardis-bot)
### release-2023.07.02 (2023/07/01 20:49)
- [2345](https://github.com/tardis-sn/tardis/pull/2345) Pre-release 2023.07.02 (2345) (@tardis-bot)
- [2344](https://github.com/tardis-sn/tardis/pull/2344) Make MontecarloTransport and montecarlo_numba track the last line interaction shell ids for real and virtual packets (2344) (@AyushiDaksh)
- [2343](https://github.com/tardis-sn/tardis/pull/2343) Rename RPacketTracker.interact_id to RPacketTracker.num_interactions (2343) (@AyushiDaksh)
- [2330](https://github.com/tardis-sn/tardis/pull/2330) Benchmarks Push To Repo Bug Fix (2330) (@atharva-2001)
- [2335](https://github.com/tardis-sn/tardis/pull/2335) Dispatch Compare Refdata Event to Refdata Repo (2335) (@atharva-2001)
- [2305](https://github.com/tardis-sn/tardis/pull/2305) Fix to helium indexing in NLTE (2305) (@aoifeboyle)
- [2341](https://github.com/tardis-sn/tardis/pull/2341) Remove duplicated continuum interaction code (2341) (@chvogl)
- [2340](https://github.com/tardis-sn/tardis/pull/2340) Post-release 2023.06.25 (2340) (@tardis-bot)
### release-2023.06.25 (2023/06/25 12:43)
- [2339](https://github.com/tardis-sn/tardis/pull/2339) Pre-release 2023.06.25 (2339) (@tardis-bot)
- [2337](https://github.com/tardis-sn/tardis/pull/2337) Separate the last iteration from Simulation.run() (2337) (@)
- [2336](https://github.com/tardis-sn/tardis/pull/2336) Fix doc failure after restructuring packet source seed (2336) (@)
- [2329](https://github.com/tardis-sn/tardis/pull/2329) Move packet seeds logic into PacketSource instead of MontecarloTransport (2329) (@)
- [2326](https://github.com/tardis-sn/tardis/pull/2326) Track bf and ff opacities with vpackets (2326) (@ymatsumu)
- [2334](https://github.com/tardis-sn/tardis/pull/2334) Post-release 2023.06.18 (2334) (@tardis-bot)
### release-2023.06.18 (2023/06/17 20:48)
- [2333](https://github.com/tardis-sn/tardis/pull/2333) Pre-release 2023.06.18 (2333) (@tardis-bot)
- [2311](https://github.com/tardis-sn/tardis/pull/2311) Make nthreads a property of MontecarloRunner instead of Simulation class (2311) (@)
- [2317](https://github.com/tardis-sn/tardis/pull/2317) Rename MontecarloRunner to MontecarloTransport (2317) (@)
- [2307](https://github.com/tardis-sn/tardis/pull/2307) Post-release 2023.06.04 (2307) (@tardis-bot)
### release-2023.06.04 (2023/06/03 20:53)
- [2306](https://github.com/tardis-sn/tardis/pull/2306) Pre-release 2023.06.04 (2306) (@tardis-bot)
### release-2023.05.28 (2023/05/27 20:51)
### release-2023.05.21 (2023/05/20 20:53)
### release-2023.05.15 (2023/05/15 10:10)
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8 changes: 4 additions & 4 deletions CITATION.cff
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Expand Up @@ -3,8 +3,8 @@
cff-version: 1.0.3
message: If you use this software, please cite it using these metadata.
# FIXME title as repository name might not be the best name, please make human readable
title: 'tardis-sn/tardis: TARDIS v2025.08.03'
doi: 10.5281/zenodo.16730222
title: 'tardis-sn/tardis: TARDIS v2025.08.17'
doi: 10.5281/zenodo.16888341
# FIXME splitting of full names is error prone, please check if given/family name are correct
authors:
- given-names: Wolfgang
Expand Down Expand Up @@ -347,7 +347,7 @@ authors:
- given-names: Atharwa
family-names: Kharkar
affiliation:
version: release-2025.08.03
date-released: 2025-08-03
version: release-2025.08.17
date-released: 2025-08-17
repository-code: https://github.com/tardis-sn/tardis
license: cc-by-4.0
18 changes: 9 additions & 9 deletions README.rst
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Expand Up @@ -62,7 +62,7 @@ following paragraph to the Acknowledgement section:
synthesis in supernovae \\citep{2014MNRAS.440..387K, |CITATION|}. The
development of \\textsc{tardis} received support from GitHub, the Google Summer of Code
initiative, and from ESA's Summer of Code in Space program. \\textsc{tardis} is a fiscally
sponsored project of NumFOCUS. \\textsc{tardis} makes extensive use of Astropy and radioactivedecay.
sponsored project of NumFOCUS. \\textsc{tardis} makes extensive use of Astropy and Pyne.

If you use any of the full relativity treatments or use TARDIS for modelling
Type II supernovae, also add `Spectral modeling of type II supernovae. I. Dilution factors <https://ui.adsabs.harvard.edu/abs/2019A%26A...621A..29V>`_
Expand Down Expand Up @@ -113,14 +113,14 @@ The following BibTeX entries are needed for the references:
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

.. |CITATION| replace:: kerzendorf_2025_16730222
.. |CITATION| replace:: kerzendorf_2025_16888341

.. |DOI_BADGE| image:: https://img.shields.io/badge/DOI-10.5281/zenodo.16730222-blue
:target: https://doi.org/10.5281/zenodo.16730222
.. |DOI_BADGE| image:: https://img.shields.io/badge/DOI-10.5281/zenodo.16888341-blue
:target: https://doi.org/10.5281/zenodo.16888341

.. code-block:: bibtex

@software{kerzendorf_2025_16730222,
@software{kerzendorf_2025_16888341,
author = {Kerzendorf, Wolfgang and
Sim, Stuart and
Vogl, Christian and
Expand Down Expand Up @@ -228,13 +228,13 @@ The following BibTeX entries are needed for the references:
Nayak U, Ashwin and
Kumar, Atul and
Kharkar, Atharwa},
title = {tardis-sn/tardis: TARDIS v2025.08.03},
title = {tardis-sn/tardis: TARDIS v2025.08.17},
month = aug,
year = 2025,
publisher = {Zenodo},
version = {release-2025.08.03},
doi = {10.5281/zenodo.16730222},
url = {https://doi.org/10.5281/zenodo.16730222},
version = {release-2025.08.17},
doi = {10.5281/zenodo.16888341},
url = {https://doi.org/10.5281/zenodo.16888341},
}

*******
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16 changes: 8 additions & 8 deletions docs/resources/credits.rst
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Expand Up @@ -74,14 +74,14 @@ The following BibTeX entries are needed for the references:
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

.. |CITATION| replace:: kerzendorf_2025_16730222
.. |CITATION| replace:: kerzendorf_2025_16888341

.. |DOI_BADGE| image:: https://img.shields.io/badge/DOI-10.5281/zenodo.16730222-blue
:target: https://doi.org/10.5281/zenodo.16730222
.. |DOI_BADGE| image:: https://img.shields.io/badge/DOI-10.5281/zenodo.16888341-blue
:target: https://doi.org/10.5281/zenodo.16888341

.. code-block:: bibtex

@software{kerzendorf_2025_16730222,
@software{kerzendorf_2025_16888341,
author = {Kerzendorf, Wolfgang and
Sim, Stuart and
Vogl, Christian and
Expand Down Expand Up @@ -189,12 +189,12 @@ The following BibTeX entries are needed for the references:
Nayak U, Ashwin and
Kumar, Atul and
Kharkar, Atharwa},
title = {tardis-sn/tardis: TARDIS v2025.08.03},
title = {tardis-sn/tardis: TARDIS v2025.08.17},
month = aug,
year = 2025,
publisher = {Zenodo},
version = {release-2025.08.03},
doi = {10.5281/zenodo.16730222},
url = {https://doi.org/10.5281/zenodo.16730222},
version = {release-2025.08.17},
doi = {10.5281/zenodo.16888341},
url = {https://doi.org/10.5281/zenodo.16888341},
}

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