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How can I use PertData with PyTorch DDP DistributedSampler?

Status: Open.

#100 In snap-stanford/GEARS;

· l024258 opened on Nov 24, 2025

simulation_single error

Status: Open.

#99 In snap-stanford/GEARS;

· bio-info-guy opened on Nov 13, 2025

Model does not converge when running model_tutorial.ipynb (loss increases after training)

Status: Open.

#96 In snap-stanford/GEARS;

· zz310 opened on Sep 12, 2025

403 Forbidden when dataverse_download <code>gene2go_all.pkl</code>

Status: Open.

#94 In snap-stanford/GEARS;

· JackKuo666 opened on Jul 3, 2025

Error when working with Norman pretrained model

Status: Open.

#93 In snap-stanford/GEARS;

· igrabski opened on Mar 12, 2025

please update version in pypi

Status: Open.

#91 In snap-stanford/GEARS;

· vjcitn opened on Feb 12, 2025

Missing files for reproducing Fig 3c

Status: Open.

#89 In snap-stanford/GEARS;

· chinaliye opened on Oct 28, 2024

How canI generate go_essential_all for mouse

Status: Open.

#84 In snap-stanford/GEARS;

· mabaoweireadingene opened on Sep 6, 2024

Question about mean baseline

Status: Open.

#82 In snap-stanford/GEARS;

· Leafaeolian opened on Aug 29, 2024

Pretrained Reploge2022 model

Status: Open.

#80 In snap-stanford/GEARS;

· Jiahao-Gao opened on Jul 29, 2024

Questions about creating pertdata with own data files

Status: Open.

#79 In snap-stanford/GEARS;

· HelloWorldLTY opened on Jul 14, 2024

Unpickling Error in gene_set_path

Status: Open.

#76 In snap-stanford/GEARS;

· bioinfonewguy opened on Jul 2, 2024