[RTM] Moving examples

[EveCharbie]

We displaced all

• the models into a common folder named examples/models/...
• all the examples to show features were put in the folder toy_examples/[old folder name]/... (except for the getting_started folder)
• the not so getting_started examples were put in the folder toy_examples/feature_examples/... and the real getting_started examples were kept in the getting_started/... forder

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If you are getting started with bioptim, you should have a look at the folder getting_started, where you will find examples to show you the fundamentals of building an Optimal Control Problem with bioptim.
The first examples you should have a look are:

• basic_ocp.py
• how_to_plot.py
• example_simulation.py

---

This change is 

[Ipuch]

@Ipuch reviewed 96 of 229 files at r1, 145 of 145 files at r2, all commit messages.
Reviewable status: all files reviewed, 1 unresolved discussion (waiting on @EveCharbie)

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bioptim/examples/getting_started/custom_phase_transitions.py line 209 at r2 (raw file):

def main():
    biorbd_model_path = ExampleUtils.examples_folder() + "/models/cube.bioMod"

.folder

Code quote:

examples_folder()

[codecov]

Codecov Report

❌ Patch coverage is 33.33333% with 126 lines in your changes missing coverage. Please review.
✅ Project coverage is 77.37%. Comparing base (476d88d) to head (6490dd5).
⚠️ Report is 625 commits behind head on master.

Files with missing lines	Patch %	Lines
...ples/feature_examples/custom_constraint_weights.py	16.12%	52 Missing ⚠️
bioptim/examples/utils.py	63.63%	4 Missing ⚠️
...se_transition_uneven_variable_number_by_mapping.py	25.00%	3 Missing ⚠️
bioptim/examples/getting_started/basic_ocp.py	33.33%	2 Missing ⚠️
...amples/getting_started/custom_phase_transitions.py	33.33%	2 Missing ⚠️
...ioptim/examples/getting_started/custom_plotting.py	33.33%	2 Missing ⚠️
...xamples/getting_started/example_cyclic_movement.py	33.33%	2 Missing ⚠️
...xamples/getting_started/example_external_forces.py	33.33%	2 Missing ⚠️
...tim/examples/getting_started/example_multiphase.py	33.33%	2 Missing ⚠️
bioptim/examples/toy_examples/acados/cube.py	33.33%	2 Missing ⚠️
... and 34 more

Additional details and impacted files

@@            Coverage Diff             @@
##           master    #1023      +/-   ##
==========================================
- Coverage   78.62%   77.37%   -1.26%     
==========================================
  Files         159      182      +23     
  Lines       18608    20186    +1578     
==========================================
+ Hits        14631    15618     +987     
- Misses       3977     4568     +591     

Flag	Coverage Δ
unittests	77.37% <33.33%> (-1.26%)	⬇️

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[EveCharbie]

@pariterre or @Ipuch all tests have passed, I think this could be merged :)

[EveCharbie]

Reviewable status: 98 of 241 files reviewed, 1 unresolved discussion (waiting on @Ipuch)

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bioptim/examples/getting_started/custom_phase_transitions.py line 209 at r2 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

.folder

Done.