Repositories list

• minotaur-recipes

  Public
  Package recipes for processing through the Minotaur workflow

  Shell

  •

  GNU General Public License v3.0

  •16•2•66•41•Updated Dec 23, 2025Dec 23, 2025

• aadr2poseidon

  Public
  TeX

  •

  MIT License

  •1•0•0•0•Updated Dec 18, 2025Dec 18, 2025

• poseidon-hs

  Public
  A toolset to work with modular genotype databases in the Poseidon format

  haskellresearch-datagenotype-data+ 1ancient-dna

  Haskell

  •

  MIT License

  •4•10•26•3•Updated Dec 15, 2025Dec 15, 2025

• poseidon-schema

  Public
  An archaeogenetic genotype data organisation file format

  standardizationdata-formatadna+ 1ancient-dna

  2•2•8•1•Updated Dec 11, 2025Dec 11, 2025

• community-archive

  Public
  The Poseidon Community Archive (PCA). ⚠️ Download from here: https://server.poseidon-adna.org/explorer/community-archive 🚫 NOT from GitHub. Do NOT clone without GIT_LFS_SKIP_SMUDGE=1.

  data-repositoryresearch-dataancient-dna

  32•12•18•4•Updated Dec 8, 2025Dec 8, 2025

• poseidon-framework.github.io

  Public
  Main landing page for getting information about the Poseidon project

  documentationresearch-datagenotype-data+ 1ancient-dna

  TeX

  •1•6•1•0•Updated Dec 8, 2025Dec 8, 2025

• poseidon-analysis-hs

  Public
  A tool to analyse genotype data (optionally in the poseidon data format)

  Haskell

  •

  MIT License

  •0•4•9•2•Updated Nov 24, 2025Nov 24, 2025

• minotaur-institutional-configs

  Public
  A collection of nextflow configurations files for different computational clusters.

  Nextflow

  •

  MIT License

  •0•0•0•0•Updated Nov 13, 2025Nov 13, 2025

• paper-directory

  Public
  Python

  •0•0•0•0•Updated Nov 10, 2025Nov 10, 2025

• minotaur-archive

  Public
  The Poseidon Minotaur Archive (PMA). ⚠️ Download from here: https://server.poseidon-adna.org/explorer/minotaur-archive 🚫 NOT from GitHub. Do NOT clone without GIT_LFS_SKIP_SMUDGE=1.

  data-repositoryresearch-dataancient-dna

  1•2•0•2•Updated Nov 4, 2025Nov 4, 2025

• scripts

  Public
  R

  •0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

• poseidon-eager

  Public
  The under-the-hood machinery of the Minotaur workflow

  Shell

  •4•0•1•0•Updated Sep 4, 2025Sep 4, 2025

• aadr-archive

  Public
  The Poseidon AADR Archive (PAA). ⚠️ Download from here: https://server.poseidon-adna.org/explorer/aadr-archive 🚫 NOT from GitHub. Do NOT clone without GIT_LFS_SKIP_SMUDGE=1.

  data-repositoryresearch-dataancient-dna

  0•1•0•0•Updated Jul 6, 2025Jul 6, 2025

• poseidon-blog

  Public
  A quarto-blog page for Poseidon.

  JavaScript

  •0•0•0•0•Updated Jun 25, 2025Jun 25, 2025

• qjanno

  Public
  A CLI tool to run SQL queries on Poseidon .janno files

  haskellsqliteresearch-data+ 1ancient-dna

  Haskell

  •

  MIT License

  •0•2•0•1•Updated Feb 12, 2025Feb 12, 2025

• janno

  Public
  R Package - Handling .janno files in R

  rresearch-dataadna+ 1ancient-dna

  R

  •

  MIT License

  •0•2•4•0•Updated Mar 13, 2024Mar 13, 2024

• poseidon-http-server

  Public archive
  A program to serve Poseidon package repositories via HTTP

  Haskell

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Feb 7, 2021Feb 7, 2021

• poseidonTestData

  Public archive
  TeX

  •0•0•0•0•Updated Dec 28, 2020Dec 28, 2020

• poseidon2.package.manager

  Public archive
  Internal data management helper for the MPI-SHH DAG

  Shell

  •0•0•1•0•Updated Jul 10, 2020Jul 10, 2020

• poseidon3-tools

  Public archive
  Python API and command line tool for working with Poseidon databases

  Python

  •

  MIT License

  •0•0•2•0•Updated May 26, 2020May 26, 2020

• poseidon3-schema

  Public archive
  Schema of the Poseidon data format

  Shell

  •

  MIT License

  •1•0•4•0•Updated May 26, 2020May 26, 2020