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Dev #473
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Dev #473
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7d5cf38
fix interval name and boolean flag
5f16086
merge nf-core-dev -> nickhsmith/dev
4f1b0ff
Merge branch 'nf-core-dev' into dev
4d393e3
rename preparerecalibration and variantcalling
27910ec
rearrange gatk haplotypecaller args
7fb49a9
fix type interval_bed -> intervals_bed
a897993
don't assume '_' in name, take all vcf.gz
b101310
remove old params, set somee string defaults to null
d0947c0
Update .gitignore
nickhsmith 3a4fc9c
Update conf/modules.config
nickhsmith 73b38fd
Update conf/modules.config
nickhsmith b767659
update germline interval naming
eaaa55a
Merge branch 'dev' of github.com:nickhsmith/sarek into dev
bbd7757
update nf-core-branch
8cb7490
Merge branch 'nf-core-dev' into dev
1e5034e
fix to match nf-core updates
eee70d0
update
07aa343
merge with nf-core-dev
7895433
Merge pull request #5 from nickhsmith/nf-core-dev
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -7,3 +7,4 @@ results/ | |
| testing/ | ||
| testing* | ||
| *.pyc | ||
| *swp | ||
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is there a reason you added this?
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I guess that was for my own sanity. Using vim as an editor creates these temporary files. I can remove it