Replace pipeline health

[edmundmiller]

Idea is to replace http://oldsite.nf-co.re/pipeline_health (Source code for that is here)

### Tasks
- [ ] Click the button that says "fix everything" to make it all green
- [x] Dashboard to show all of the green checks

Project goals

Goal is to replace https://oldsite.nf-co.re/pipeline_health

This repo will be the "Actions" section at the bottom. We can then create a reporting page if we really need to see all the green checks

Old Pipeline Health PHP code

New Pipeline Health page

Initial Roll-out

The new pipelines that are broken:

• demo

• testpipeline

• denovotranscript

• meerpipe

• pairgenomealign

• phaseimpute

• reportho

Maybe:

• scdownstream
• scnanoseq

Plan

Short-term

1. Import a pipeline that has all the right settings
2. Fix the 5 pipelines above with the correct settings from the "model" repo
3. Keep importing new pipelines until we gain confidence in it.

Long-term

1. Wrangle in core_repos
2. Roll out to all pipelines
3. Switch all repos to main