Turn synister into a functional cookie cutter #7
Description
The goal is to make it possible for somebody to re-create the synister pipeline with new data. To do this, we have decided to create a python cookie cutter which contains the bare minimum scripts for how to get started.
The advantages of this are that, if we update the best practices on the pipeline, we can easily fetch those best practices from the cookie cutter without affecting each dataset's necessarily custom code. We will be using cruft.