`lint.per-file-ignores` option is ignored by native server in `ruff.toml`

[SXHRYU]

Basically it's the same issue as #11751 but the problem still occurs when using ruff.toml as config file.

jic: this happens in VS Code, when ruff checking via console everything's okay.

[MichaReiser]

Could you share a small reproduction? How does the directory layout look like? What files do you open in VS code.

I'm asking because I just tried what you described and VS Code correctly shows or doesn't show diagnostic based on the per-file-ignores in the ruff.toml

[amoralesc]

@MichaReiser I'm experiencing the same problem. I might add that I'm using a custom location for my Ruff config file, setting it under .config/.ruff.toml. Also working on Dev Containers.

I want to ignore the pydocstyle linter on all files under src/migrations/versions. Here's my environment (simplified) and steps to reproduce:

Versions

• ruff: 0.7.3
• charliermarsh.ruff extension: latest
• VSCode: 1.95.2

Project structure:

.
├─ .config
│  └─ .ruff.toml
├─ .venv
└─ src
   └─ migrations
      └─ versions
         └─ 1e8f6175aeef_a.py # <- file with errors

VSCode settings:

{
  "python.defaultInterpreterPath": "${workspaceFolder}/.venv/bin/python",
  "[python]": {
    "editor.defaultFormatter": "charliermarsh.ruff",
    "editor.formatOnSave": true,
    "editor.codeActionsOnSave": {
      "source.organizeImports": "explicit"
    }
  },
  "ruff.importStrategy": "fromEnvironment",
  "ruff.interpreter": ["${workspaceFolder}/.venv/bin/python"],
  "ruff.fixAll": true,
  "ruff.organizeImports": true,
  "ruff.configuration": "${workspaceFolder}/.config/.ruff.toml",
}

Ruff config file:

target-version = "py312"
line-length    = 80
indent-width   = 4

[lint]
select = [
  "D"
]

[lint.per-file-ignores]
"**/versions/*.py" = [
  "D",
]

[lint.pydocstyle]
convention = "numpy"

The problematic file in question:

"""Test

Revision ID: 1e8f6175aeef
Revises:
Create Date: 2024-11-14 02:42:01.465193

"""

from collections.abc import Sequence

# revision identifiers, used by Alembic.
revision: str = "1e8f6175aeef"
down_revision: str | None = None
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None


def upgrade() -> None:
    # ### commands auto generated by Alembic - please adjust! ###
    pass
    # ### end Alembic commands ###


def downgrade() -> None:
    # ### commands auto generated by Alembic - please adjust! ###
    pass
    # ### end Alembic commands ###

When the file is on focus:

Running ruff check from the project root:

ruff check --config .config/.ruff.toml .

All checks passed!

For good measure, commenting out the [lint.per-file-ignores] section and running ruff again returns:

src/migrations/versions/1e8f6175aeef_a.py:1:1: D400 First line should end with a period
  |
1 | / """Test
2 | | 
3 | | Revision ID: 1e8f6175aeef
4 | | Revises:
5 | | Create Date: 2024-11-14 02:42:01.465193
6 | | 
7 | | """
  | |___^ D400
8 |   
9 |   from collections.abc import Sequence
  |
  = help: Add period

src/migrations/versions/1e8f6175aeef_a.py:18:5: D103 Missing docstring in public function
   |
18 | def upgrade() -> None:
   |     ^^^^^^^ D103
19 |     # ### commands auto generated by Alembic - please adjust! ###
20 |     pass
   |

src/migrations/versions/1e8f6175aeef_a.py:24:5: D103 Missing docstring in public function
   |
24 | def downgrade() -> None:
   |     ^^^^^^^^^ D103
25 |     # ### commands auto generated by Alembic - please adjust! ###
26 |     pass
   |

Found 3 errors.
No fixes available (1 hidden fix can be enabled with the `--unsafe-fixes` option).

[amoralesc]

Same behavior with exclude = [] on the Ruff config file.

Temporary workaround: use ruff.exclude in the VSCode settings.json. From the docs.

[dhruvmanila]

@amoralesc Do you mind trying it outside the Dev Container? There have been a couple of issues when working inside a dev container and I want to find some time to look into those soon.

[amoralesc]

@dhruvmanila I can indeed reproduce this error outside of the dev container. Tested with extend-exclude and [lint.per-file-ignores].

My local environment is WSL. Worth noting that VSCode through WSL is still a remote server.

@SXHRYU Can you confirm how does your environment look like?

[dhruvmanila]

Ok, thanks for confirming. Although I don't have a Windows machine I can try reproducing on a Mac.

[dhruvmanila]

@amoralesc I'm looking at this now but just want to point out a couple of things:

  "ruff.interpreter": ["./.venv/bin/python"],

I don't think this will work (astral-sh/ruff-vscode#553), you'll need to update it to:

  "ruff.interpreter": ["${workspaceFolder}/.venv/bin/python"],

But, otherwise I can reproduce this on my end although I'm not sure why this is happening.

[amoralesc]

@dhruvmanila Yes, my bad there. I wanted to generalize the reproducible environment and totally forgot that dot access doesn't work in ruff.interpreter. I'm actually using ${containerWorkspaceFolder} there as well as in ruff.configuration. I'm gonna update the original snippet.

I may also add that the behavior is rather strange. Let's call the the problematic file file.py, deeply nested at /path/to/file.py. If I exclude the file like this:

# .config/.ruff.toml

# either like:
exclude = ["**/file.py"]
# or:
[lint.per-file-ignores]
"**/file.py" = ["D"]

That actually works correctly! This is not the ideal solution though, because I'd want to ignore everything under path/to. So when the pattern matching is changed to ./path/to/*.py, **/path/to/*.py or **/to/*.py, it fails.

[MichaReiser]

@dhruvmanila and I narrowed the problem down to that patterns in .config/ruff.toml are resolved relative to the configuration directory, which I think is surprising. So changing per-file-ignores to ../**/file.py should work. We'll look into if it makes sense to change the behavior

[amoralesc]

I can confirm the fix on #14282 (comment) works on my environment.

I can't comment on this being the intended behavior, but it is still different from calling ruff from the project's root with:

ruff check --config .config/.ruff.toml

Thankfully, adding the .. does work on both calls (VSCode extension and ruff).