Bioinformatician & Biotechnologist Β· Cancer systems biology Β· Reproducible analytics
π Current focus: PI3K-C2Ξ±βESCRT axis in cytokinesis, CIN & innate immunity
π§ͺ Tooling: R (tidyverse, limma, Seurat, Shiny), Python (NumPy/Pandas, PyQt5, OpenCV), MS-proteomics, RNA-seq
π― I care about: clean data pipelines, reproducibility (CI/Docker), and translational impact.
- 𧬠pi4ka-midbody-proteomics β Shiny app to explore cytokinesis interactors (volcano/GO/heatmap)
- 𧫠proteomics-escrt-pipeline β TMT/LFQ pipeline with QC, enrichment, and reports
- π§ rnaseq-deseq2-template β Galaxy/Salmon β tximport/DESeq2 template (end-to-end)
- π₯ lif-to-timelapse-app β PyQt5 ROI tracker exporting RGB time-lapse videos
- π qPCR-ddCt-notebook β Template notebooks and graphs for ddCt analysis
- π papers-notes-quarto β My structured notes and tutorials in bioinformatics
π CV Β· βοΈ arezoukahnamouei@gmail.com Β· π LinkedIn