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GATK4 first round without MuTect1 and indel realignment#607

Merged
maxulysse merged 41 commits intoSciLifeLab:masterfrom
szilvajuhos:master
Aug 14, 2018
Merged

GATK4 first round without MuTect1 and indel realignment#607
maxulysse merged 41 commits intoSciLifeLab:masterfrom
szilvajuhos:master

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