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fix chunk_size
1 parent 91fd964 commit b54d2bb

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src/bam_utils.h

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -7,7 +7,7 @@
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#include "collect_var.h"
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#define LONGCALLD_BAM_CHUNK_READ_COUNT 4000
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#define LONGCALLD_BAM_CHUNK_REG_SIZE 50000 // 0.5M/1M
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#define LONGCALLD_BAM_CHUNK_REG_SIZE 500000 // 0.5M/1M
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// region-based BAM_CHUNK: no split for a single chromosome
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// multi regions may be merged into a single chunk if n_regs < 64
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// #define LONGCALLD_BAM_MIN_REG_CHUNK_PER_RUN 64 // n_threads * 4

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