remove WARN message about no process matching config selector

maxulysse · maxulysse · commit 9b619fe8eebf · 2022-07-08T09:16:30.000+02:00
diff --git a/conf/modules.config b/conf/modules.config
@@ -1191,7 +1191,9 @@ process{
                     pattern: "*{gz,gz.tbi}"
             ]
         }
+    }
 
+    if (params.tools && (params.tools.contains('snpeff') || params.tools.contains('merge'))) {
         withName: 'NFCORE_SAREK:SAREK:ANNOTATE:ANNOTATION_SNPEFF:TABIX_BGZIPTABIX' {
             publishDir       = [
                 mode: params.publish_dir_mode,

Original file line number	Diff line number	Diff line change
`@@ -1191,7 +1191,9 @@ process{`
`1191`	`1191`	`pattern: "*{gz,gz.tbi}"`
`1192`	`1192`	`]`
`1193`	`1193`	`}`
	`1194`	`+ }`
`1194`	`1195`
	`1196`	`+ if (params.tools && (params.tools.contains('snpeff') \|\| params.tools.contains('merge'))) {`
`1195`	`1197`	`withName: 'NFCORE_SAREK:SAREK:ANNOTATE:ANNOTATION_SNPEFF:TABIX_BGZIPTABIX' {`
`1196`	`1198`	`publishDir = [`
`1197`	`1199`	`mode: params.publish_dir_mode,`