Prepared statement enhancements

This change implements a number of setter methods on
`PreparedStatement` that were previously throwing
`SQLFeatureNotSupportedException`.

`set*Stream` group of methods is implemented only for compatibility
with existing tools, no actual streaming is used on DB level - full
input is read to string/bytes before passing it to DB.

`execute`/`executeUpdate` methods for generated keys are implemented
only for cases when generated keys are not requested.

`setTime/Date/Timestamp` methods with `Calendar` (time zone) support
are implemented fully following the same approach used before in #166.
Also the logic for `setTime` method without `Calendar` is fixed to
correctly NOT use default JVM time zone.

Testing: new tests added to cover implemented methods; timestamp tests
are moved to separate file and time zone-specific tests are added.

Fixes: #195

Author: staticlibs

src/main/java/org/duckdb/DuckDBPreparedStatement.java

@@ -1,12 +1,29 @@
 package org.duckdb;
 
 import java.sql.Time;
-import java.time.LocalDate;
-import java.time.LocalDateTime;
+import java.time.*;
+import java.util.TimeZone;
 import java.util.concurrent.TimeUnit;
 
 public class DuckDBTime extends DuckDBTimestamp {
     public DuckDBTime(Time time) {
-        super(TimeUnit.MILLISECONDS.toMicros(time.getTime()));
+        super(TimeUnit.MILLISECONDS.toMicros(timeToMillis(time)));
+    }
+
+    public DuckDBTime(LocalTime lt) {
+        super(TimeUnit.NANOSECONDS.toMicros(lt.toNanoOfDay()));
+    }
+
+    private static long timeToMillis(Time time) {
+        // Per JDBC spec PreparedStatement#setTime() must NOT use
+        // default JVM time zone.
+        // The Time we have is already shifted with the default time zone,
+        // so we need to shift it back to keep hours/minutes/seconds
+        // values intact.
+        Instant instant = Instant.ofEpochMilli(time.getTime());
+        ZoneId zoneId = TimeZone.getDefault().toZoneId();
+        LocalDateTime ldt = LocalDateTime.ofInstant(instant, zoneId);
+        ZonedDateTime utc = ldt.atZone(ZoneId.of("UTC"));
+        return utc.toInstant().toEpochMilli();
     }
 }

src/main/java/org/duckdb/DuckDBTime.java

@@ -121,6 +121,8 @@ public static Object valueOf(Object x) {
             x = new DuckDBDate((Date) x);
         } else if (x instanceof Time) {
             x = new DuckDBTime((Time) x);
+        } else if (x instanceof LocalTime) {
+            x = new DuckDBTime((LocalTime) x);
         }
         return x;
     }

src/main/java/org/duckdb/DuckDBTimestamp.java

@@ -1,8 +1,5 @@
 package org.duckdb;
 
-import java.io.ByteArrayOutputStream;
-import java.io.IOException;
-import java.io.InputStream;
 import java.sql.SQLException;
 
 final class JdbcUtils {
@@ -15,18 +12,6 @@ static <T> T unwrap(Object obj, Class<T> iface) throws SQLException {
         return (T) obj;
     }
 
-    static byte[] readAllBytes(InputStream x) throws IOException {
-        ByteArrayOutputStream out = new ByteArrayOutputStream();
-        byte[] thing = new byte[256];
-        int length;
-        int offset = 0;
-        while ((length = x.read(thing)) != -1) {
-            out.write(thing, offset, length);
-            offset += length;
-        }
-        return out.toByteArray();
-    }
-
     private JdbcUtils() {
     }
 }

src/main/java/org/duckdb/JdbcUtils.java

@@ -0,0 +1,52 @@
+package org.duckdb.io;
+
+import java.io.ByteArrayOutputStream;
+import java.io.IOException;
+import java.io.InputStream;
+import java.io.Reader;
+import java.sql.SQLException;
+
+public class IOUtils {
+
+    public static byte[] readAllBytes(InputStream x) throws SQLException {
+        try {
+            ByteArrayOutputStream out = new ByteArrayOutputStream();
+            byte[] buffer = new byte[8192];
+            int length;
+            while ((length = x.read(buffer)) != -1) {
+                out.write(buffer, 0, length);
+            }
+            return out.toByteArray();
+        } catch (IOException e) {
+            throw new SQLException(e);
+        }
+    }
+
+    public static String readToString(Reader reader) throws SQLException {
+        try {
+            StringBuilder sb = new StringBuilder();
+            char[] buffer = new char[4096];
+            int length;
+            while ((length = reader.read(buffer)) != -1) {
+                sb.append(buffer, 0, length);
+            }
+            return sb.toString();
+        } catch (IOException e) {
+            throw new SQLException();
+        }
+    }
+
+    public static InputStream wrapStreamWithMaxBytes(InputStream is, long maxBytes) {
+        if (maxBytes < 0) {
+            return is;
+        }
+        return new LimitedInputStream(is, maxBytes);
+    }
+
+    public static Reader wrapReaderWithMaxChars(Reader reader, long maxChars) {
+        if (maxChars < 0) {
+            return reader;
+        }
+        return new LimitedReader(reader, maxChars);
+    }
+}

src/main/java/org/duckdb/io/IOUtils.java

@@ -0,0 +1,54 @@
+package org.duckdb.io;
+
+import java.io.IOException;
+import java.io.InputStream;
+
+public class LimitedInputStream extends InputStream {
+    private final InputStream source;
+    private final long maxBytesToRead;
+    private long bytesRead;
+
+    public LimitedInputStream(InputStream source, long maxBytesToRead) {
+        if (source == null) {
+            throw new IllegalArgumentException("Source input stream cannot be null");
+        }
+        if (maxBytesToRead < 0) {
+            throw new IllegalArgumentException("maxBytesToRead must be non-negative");
+        }
+        this.source = source;
+        this.maxBytesToRead = maxBytesToRead;
+        this.bytesRead = 0;
+    }
+
+    @Override
+    public int read() throws IOException {
+        if (bytesRead >= maxBytesToRead) {
+            return -1; // EOF
+        }
+        int result = source.read();
+        if (result != -1) {
+            bytesRead++;
+        }
+        return result;
+    }
+
+    @Override
+    public int read(byte[] b, int off, int len) throws IOException {
+        if (bytesRead >= maxBytesToRead) {
+            return -1; // EOF
+        }
+        // Calculate the maximum number of bytes we can read
+        long bytesRemaining = maxBytesToRead - bytesRead;
+        int bytesToRead = (int) Math.min(len, bytesRemaining);
+        int result = source.read(b, off, bytesToRead);
+        if (result != -1) {
+            bytesRead += result;
+        }
+        return result;
+    }
+
+    @Override
+    public void close() throws IOException {
+        source.close();
+    }
+}

src/main/java/org/duckdb/io/LimitedInputStream.java

@@ -0,0 +1,53 @@
+package org.duckdb.io;
+
+import java.io.IOException;
+import java.io.Reader;
+
+public class LimitedReader extends Reader {
+    private final Reader source;
+    private final long maxCharsToRead;
+    private long charsRead;
+
+    public LimitedReader(Reader source, long maxCharsToRead) {
+        if (source == null) {
+            throw new IllegalArgumentException("Source Reader cannot be null");
+        }
+        if (maxCharsToRead < 0) {
+            throw new IllegalArgumentException("maxCharsToRead must be non-negative");
+        }
+        this.source = source;
+        this.maxCharsToRead = maxCharsToRead;
+        this.charsRead = 0;
+    }
+
+    @Override
+    public int read() throws IOException {
+        if (charsRead >= maxCharsToRead) {
+            return -1; // EOF
+        }
+        int result = source.read();
+        if (result != -1) {
+            charsRead++;
+        }
+        return result;
+    }
+
+    @Override
+    public int read(char[] cbuf, int off, int len) throws IOException {
+        if (charsRead >= maxCharsToRead) {
+            return -1; // EOF
+        }
+        long charsRemaining = maxCharsToRead - charsRead;
+        int charsToRead = (int) Math.min(len, charsRemaining);
+        int result = source.read(cbuf, off, charsToRead);
+        if (result != -1) {
+            charsRead += result;
+        }
+        return result;
+    }
+
+    @Override
+    public void close() throws IOException {
+        source.close();
+    }
+}