UB matrix reported by pa() should match internal representation #697
Workflow file for this run
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| name: Unit Tests | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: # allow manual triggering | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| lint: | |
| name: Code style | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - uses: actions/setup-python@v6 | |
| with: | |
| python-version: "3.13" | |
| - name: Cache pip | |
| uses: actions/cache@v5 | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-cache-${{ runner.os }}-py3.13-${{ hashFiles('**/pyproject.toml','**/requirements*.txt') }} | |
| - name: Install ruff and run | |
| run: | | |
| set -euo pipefail | |
| python -m pip install --upgrade pip | |
| python -m pip install ruff | |
| ruff check . | |
| tests: | |
| name: Python ${{ matrix.python-version }} | |
| needs: lint | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.10" | |
| - "3.11" | |
| - "3.12" | |
| - "3.13" | |
| # - "3.14" # not installable because it requires python_rc =* *, which does not exist | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Cached Python ${{ matrix.python-version }} environment | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| cache-environment: true | |
| cache-environment-key: env-key-${{ matrix.python-version }} | |
| condarc: | | |
| channels: | |
| - conda-forge | |
| - nodefaults | |
| channel-priority: flexible | |
| environment-name: micromamba-test-env-py-${{ matrix.python-version }} | |
| create-args: >- | |
| bson | |
| hkl | |
| pyepics | |
| pytest | |
| python=${{ matrix.python-version }} | |
| pyyaml | |
| ruamel.yaml | |
| setuptools-scm | |
| tiled | |
| yaml | |
| - name: Cache pip (per matrix) | |
| uses: actions/cache@v5 | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-cache-${{ runner.os }}-py${{ matrix.python-version }}-${{ hashFiles('**/pyproject.toml','**/requirements*.txt') }} | |
| - name: Start EPICS softIoc | |
| run: | | |
| set -euo pipefail | |
| caRepeater & | |
| softIoc \ | |
| -S \ | |
| -m "P=hklpy2:" \ | |
| -d ./src/hklpy2/tests/testing.db \ | |
| -x "hklpy2" \ | |
| ./src/hklpy2/tests/st.cmd & | |
| echo "Waiting for EPICS IOC to start..." | |
| sleep 15 | |
| echo "EPICS IOC should be running now." | |
| - name: Install source and requirements (fast, allow pre) | |
| run: | | |
| set -euo pipefail | |
| python -m pip install --upgrade pip | |
| pip install --pre tiled | |
| pip install --pre -e .[all] | |
| - name: Diagnostic | |
| run: | | |
| micromamba info || true | |
| micromamba list || true | |
| micromamba env list || true | |
| - name: Check on the EPICS IOC | |
| run: | | |
| set -euo pipefail | |
| echo "info hklpy2:wavelength = $(cainfo hklpy2:wavelength)" | |
| caget hklpy2:BaseVersion | |
| caget hklpy2:energy.{NAME,VAL,EGU,DESC} | |
| caget hklpy2:wavelength.{NAME,VAL,EGU,DESC} | |
| - name: Run tests with pytest & coverage | |
| shell: bash -l {0} | |
| run: | | |
| set -vxeuo pipefail | |
| mkdir -p reports | |
| # ensure correct coverage | |
| python -m pip install --upgrade --force-reinstall coverage | |
| # run tests under coverage; keep exit code handling so we can still gather reports | |
| python -m coverage \ | |
| run \ | |
| --concurrency=thread \ | |
| --parallel-mode \ | |
| -m pytest \ | |
| -q \ | |
| --junitxml=reports/junit.xml . | |
| # combine and report | |
| python -m coverage combine || true | |
| python -m coverage xml -i -o coverage.xml || true | |
| python -m coverage report --precision 3 -m || true | |
| # check junit for failures | |
| if [ -f reports/junit.xml ]; then | |
| if grep -E "failures=\"[1-9][0-9]*\"|errors=\"[1-9][0-9]*\"" reports/junit.xml; then | |
| echo "Detected test failures or errors in reports/junit.xml" | |
| exit 1 | |
| fi | |
| else | |
| echo "No junit.xml produced; assume pytest failed." | |
| exit 1 | |
| fi | |
| - name: Coverage debug | |
| if: failure() || always() | |
| run: | | |
| python -c "import coverage, sys; print('coverage:', getattr(coverage, '__file__', 'no-file'), getattr(coverage, '__version__', 'no-version'))" | |
| - name: Install (force reinstall) coveralls | |
| run: python -m pip install --upgrade --force-reinstall coveralls | |
| - name: Upload test artifacts (junit, coverage) | |
| if: always() | |
| uses: actions/upload-artifact@v6 | |
| with: | |
| name: test-reports-${{ matrix.python-version }} | |
| path: | | |
| reports/ | |
| .coverage* | |
| - name: Upload to Coveralls (best-effort) | |
| if: always() | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_FLAG_NAME: ${{ matrix.test-name }} | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| set -euo pipefail | |
| coveralls debug || true | |
| coveralls --service=github || true | |
| coveralls: | |
| name: Report unit test coverage to coveralls | |
| needs: tests | |
| runs-on: ubuntu-latest | |
| container: python:3-slim | |
| steps: | |
| - name: Install git and coveralls | |
| run: | | |
| set -euo pipefail | |
| apt-get -y update && apt-get install -y git | |
| python3 -m pip install --no-cache-dir --upgrade pip coveralls | |
| - name: Finish coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| set -euo pipefail | |
| coveralls --service=github --finish |