save & restore crystal (& diffractometer) orientation #244
Workflow file for this run
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| name: Unit Tests | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the main branch | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: # allow manual triggering | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| lint: | |
| name: Code style | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Install package | |
| run: | | |
| set -vxeuo pipefail | |
| python -m pip install --upgrade pip | |
| - name: Run ruff | |
| uses: davidslusser/[email protected] | |
| with: | |
| python_version: "3.11" | |
| tests: | |
| name: Python ${{ matrix.python-version }} | |
| needs: lint | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: | |
| - "3.10" # not 3.10 which truncates to 3.1 | |
| - "3.11" | |
| - "3.12" | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Create Python ${{ matrix.python-version }} environment | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| cache-environment: true | |
| cache-environment-key: env-key-${{ matrix.python-version }} | |
| condarc: | | |
| channel-priority: flexible | |
| environment-file: environment.yml | |
| environment-name: anaconda-test-env-py-${{ matrix.python-version }} | |
| create-args: >- | |
| pytest | |
| python=${{ matrix.python-version }} | |
| pyyaml | |
| ruamel_yaml | |
| yaml | |
| setuptools-scm | |
| - name: Install code coverage requirements by pip | |
| run: | | |
| # https://github.com/pradyunsg/furo/discussions/308#discussioncomment-3064061 | |
| pip install coverage coveralls | |
| - name: Install source code | |
| run: pip install -e . --no-deps | |
| - name: Diagnostic | |
| run: | | |
| micromamba info | |
| micromamba list | |
| conda config --show-sources | |
| conda config --show | |
| micromamba env list | |
| printenv | sort | |
| - name: Run tests with pytest & coverage | |
| shell: bash -l {0} | |
| run: | | |
| coverage run --concurrency=thread --parallel-mode -m pytest -vvv . | |
| coverage combine | |
| coverage report --precision 3 -m | |
| - name: Upload to coveralls | |
| # https://github.com/TheKevJames/coveralls-python | |
| shell: bash -l {0} | |
| run: | | |
| micromamba list cover | |
| micromamba list git | |
| which coveralls | |
| coveralls debug | |
| coveralls --service=github | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_FLAG_NAME: ${{ matrix.test-name }} | |
| COVERALLS_PARALLEL: true | |
| # https://coveralls-python.readthedocs.io/en/latest/usage/configuration.html#github-actions-support | |
| coveralls: | |
| name: Report unit test coverage to coveralls | |
| needs: tests | |
| runs-on: ubuntu-latest | |
| container: python:3-slim | |
| steps: | |
| - name: Gather coverage and report to Coveralls | |
| run: | | |
| set -vxeuo pipefail | |
| apt-get install git | |
| python3 -m pip3 install \ | |
| --no-cache-dir \ | |
| --root-user-action ignore \ | |
| --upgrade pip coveralls | |
| # debug mode: output prepared json and reported files list to stdout | |
| # https://coveralls-python.readthedocs.io/en/latest/troubleshooting.html | |
| # | |
| echo "Finally!" | |
| coveralls debug | |
| coveralls --service=github --finish | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} |